Microbial network illustration showing interconnected microorganism communities

Microbial Networks Lab

Unveiling the interconnectedness of organisms across space and time

Why are organisms where they are, and why do they do what they do? Our work applies an ecological and computational perspective to investigate how microbial communities — and the complex networks that connect them — shape the health of their hosts and ecosystems.

Research Areas

Microbial nutritional interaction network diagram

Nutritional interactions in microbiomes

Using metabolic modelling to unveil microbial food-webs.

Venn diagram of host-microbe interactions across animals

Host-microbe interactions in evolution

From diversity of symbionts to trait evolution.

Microbiome selection and engineering illustration

Microbiome Selection & Engineering

Combining bioinformatics and experiments to guide microbiome manipulation.

Why Hologenomics?

holo– from Greek holos, meaning "whole, entire, complete"

The 'holobiont' term was popularised by Lynn Margulis and usually refers to a host and the assemblage of organisms living on or within it. The host and microbial genomes of a holobiont are collectively known as a hologenome. Hologenomics therefore refers to studying genomes of entire holobionts, especially the emergent properties that would not be measurable when studied in isolation.